Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-1287 in GLB Brain Sun Cluster 58 Table contains all genes in the GLB Brain Sun cluster number 58. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1287 79177 ZNF576 zinc finger protein 576 [Source:HGNC Symbol;Acc:28357] zzz999 25948 KBTBD2 kelch repeat and BTB (POZ) domain containing 2 [Source:HGNC Symbol;Acc:21751] zzz999 283652 SLC24A5 solute carrier family 24, member 5 [Source:HGNC Symbol;Acc:20611] zzz999 51029 PPPDE1 PPPDE peptidase domain containing 1 [Source:HGNC Symbol;Acc:24264] T 5817 PVR poliovirus receptor [Source:HGNC Symbol;Acc:9705] T 83884 SLC25A2 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2 [Source:HGNC Symbol;Acc:22921] zzz999 115950 ZNF653 zinc finger protein 653 [Source:HGNC Symbol;Acc:25196] zzz999 9982 FGFBP1 fibroblast growth factor binding protein 1 [Source:HGNC Symbol;Acc:19695] zzz999 114770 PGLYRP2 peptidoglycan recognition protein 2 [Source:HGNC Symbol;Acc:30013] zzz999 169044 COL22A1 collagen, type XXII, alpha 1 [Source:HGNC Symbol;Acc:22989] zzz999 22847 ZNF507 zinc finger protein 507 [Source:HGNC Symbol;Acc:23783] zzz999 25934 NIPSNAP3A nipsnap homolog 3A (C. elegans) [Source:HGNC Symbol;Acc:23619] zzz999 126299 ZNF428 zinc finger protein 428 [Source:HGNC Symbol;Acc:20804] zzz999 29934 SNX12 sorting nexin 12 [Source:HGNC Symbol;Acc:14976] zzz999 54925 ZNF434 zinc finger protein 434 [Source:HGNC Symbol;Acc:20812] zzz999 6421 SFPQ splicing factor proline/glutamine-rich [Source:HGNC Symbol;Acc:10774] zzz999 170825 GSX2 GS homeobox 2 [Source:HGNC Symbol;Acc:24959] zzz999 27201 GPR78 G protein-coupled receptor 78 [Source:HGNC Symbol;Acc:4528] zzz999 57096 RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 [Source:HGNC Symbol;Acc:13436] zzz999 64949 MRPS26 mitochondrial ribosomal protein S26 [Source:HGNC Symbol;Acc:14045] T 149986 LSM14B LSM14B, SCD6 homolog B (S. cerevisiae) [Source:HGNC Symbol;Acc:15887] zzz999 81849 ST6GALNAC5 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 [Source:HGNC Symbol;Acc:19342] zzz999 81846 SBF2 SET binding factor 2 [Source:HGNC Symbol;Acc:2135] zzz999 10847 SRCAP Snf2-related CREBBP activator protein [Source:HGNC Symbol;Acc:16974] zzz999 54877 ZCCHC2 zinc finger, CCHC domain containing 2 [Source:HGNC Symbol;Acc:22916] zzz999 221749 C6orf145 chromosome 6 open reading frame 145 [Source:HGNC Symbol;Acc:21361] T 60481 ELOVL5 ELOVL family member 5, elongation of long chain fatty acids (FEN1/Elo2, SUR4/Elo3-like, yeast) [Source:HGNC Symbol;Acc:21308] zzz999 8484 GALR3 galanin receptor 3 [Source:HGNC Symbol;Acc:4134] zzz999 114794 ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2 [Source:HGNC Symbol;Acc:29396] T 80303 EFHD1 EF-hand domain family, member D1 [Source:HGNC Symbol;Acc:29556] T 92610 TIFA TRAF-interacting protein with forkhead-associated domain [Source:HGNC Symbol;Acc:19075] T 55670 PEX26 peroxisomal biogenesis factor 26 [Source:HGNC Symbol;Acc:22965] zzz999 117531 TMC1 transmembrane channel-like 1 [Source:HGNC Symbol;Acc:16513] T 27297 CRCP CGRP receptor component [Source:HGNC Symbol;Acc:17888] zzz999 94056 SYAP1 synapse associated protein 1 [Source:HGNC Symbol;Acc:16273] zzz999 27198 GPR81 G protein-coupled receptor 81 [Source:HGNC Symbol;Acc:4532] zzz999 3670 ISL1 ISL LIM homeobox 1 [Source:HGNC Symbol;Acc:6132] T 6668 SP2 Sp2 transcription factor [Source:HGNC Symbol;Acc:11207] T 3219 HOXB9 homeobox B9 [Source:HGNC Symbol;Acc:5120] zzz999 3274 HRH2 histamine receptor H2 [Source:HGNC Symbol;Acc:5183] zzz999 10319 LAMC3 laminin, gamma 3 [Source:HGNC Symbol;Acc:6494] T 27342 RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1 [Source:HGNC Symbol;Acc:17676] zzz999 65250 C5orf42 chromosome 5 open reading frame 42 [Source:HGNC Symbol;Acc:25801] zzz999 4299 AFF1 AF4/FMR2 family, member 1 [Source:HGNC Symbol;Acc:7135] zzz999 171483 FAM9B family with sequence similarity 9, member B [Source:HGNC Symbol;Acc:18404] zzz999 57613 KIAA1467 KIAA1467 [Source:HGNC Symbol;Acc:29288] zzz999 112752 C14orf179 chromosome 14 open reading frame 179 [Source:HGNC Symbol;Acc:29669] zzz999 63898 SH2D4A SH2 domain containing 4A [Source:HGNC Symbol;Acc:26102] zzz999 54957 TXNL4B thioredoxin-like 4B [Source:HGNC Symbol;Acc:26041] T 80119 PIF1 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26220] zzz999 6786 STIM1 stromal interaction molecule 1 [Source:HGNC Symbol;Acc:11386] zzz999 54680 ZNHIT6 zinc finger, HIT-type containing 6 [Source:HGNC Symbol;Acc:26089] zzz999 9080 CLDN9 claudin 9 [Source:HGNC Symbol;Acc:2051] zzz999 7342 UBP1 upstream binding protein 1 (LBP-1a) [Source:HGNC Symbol;Acc:12507] T 83401 ELOVL3 elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3 [Source:HGNC Symbol;Acc:18047] zzz999 92370 ACPL2 acid phosphatase-like 2 [Source:HGNC Symbol;Acc:26303] T 219902 TMEM136 transmembrane protein 136 [Source:HGNC Symbol;Acc:28280] zzz999 57690 TNRC6C trinucleotide repeat containing 6C [Source:HGNC Symbol;Acc:29318] zzz999 11108 PRDM4 PR domain containing 4 [Source:HGNC Symbol;Acc:9348] T 10152 ABI2 abl-interactor 2 [Source:HGNC Symbol;Acc:24011] T 25819 CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae) [Source:HGNC Symbol;Acc:14254] T 9797 TATDN2 TatD DNase domain containing 2 [Source:HGNC Symbol;Acc:28988] T 57819 LSM2 LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:13940] zzz999 81037 CLPTM1L CLPTM1-like [Source:HGNC Symbol;Acc:24308] zzz999 9609 RAB36 RAB36, member RAS oncogene family [Source:HGNC Symbol;Acc:9775] T 5737 PTGFR prostaglandin F receptor (FP) [Source:HGNC Symbol;Acc:9600] zzz999 200734 SPRED2 sprouty-related, EVH1 domain containing 2 [Source:HGNC Symbol;Acc:17722] zzz999 55561 CDC42BPG CDC42 binding protein kinase gamma (DMPK-like) [Source:HGNC Symbol;Acc:29829] zzz999 1915 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 [Source:HGNC Symbol;Acc:3189] zzz999 23434 C3orf27 chromosome 3 open reading frame 27 [Source:HGNC Symbol;Acc:17099] zzz999 326340 ZAR1 zygote arrest 1 [Source:HGNC Symbol;Acc:20436] zzz999 51550 CINP cyclin-dependent kinase 2 interacting protein [Source:HGNC Symbol;Acc:23789] zzz999 221823 PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1 [Source:HGNC Symbol;Acc:9463] zzz999 80012 PHC3 polyhomeotic homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:15682] T 81831 NETO2 neuropilin (NRP) and tolloid (TLL)-like 2 [Source:HGNC Symbol;Acc:14644] T 10531 PITRM1 pitrilysin metallopeptidase 1 [Source:HGNC Symbol;Acc:17663] zzz999 5520 PPP2R2A protein phosphatase 2, regulatory subunit B, alpha [Source:HGNC Symbol;Acc:9304] zzz999 125919 ZNF543 zinc finger protein 543 [Source:HGNC Symbol;Acc:25281] zzz999 3690 C17orf57 chromosome 17 open reading frame 57 [Source:HGNC Symbol;Acc:26864] zzz999 134430 WDR36 WD repeat domain 36 [Source:HGNC Symbol;Acc:30696] T 5284 PIGR polymeric immunoglobulin receptor [Source:HGNC Symbol;Acc:8968] zzz999 7184 HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 [Source:HGNC Symbol;Acc:12028] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.